Abstract:
The essential yeast protein GPN-loop GTPase 1 (Npa3) plays a critical
role in RNA polymerase II (RNAPII) assembly and subsequent nuclear import.
We previously identified a synthetic lethal interaction between mutants lacking
the carboxy-terminal 106-amino acid tail of Npa3 (npa3∆C) and mutants lacking
Bud site selection protein 27 (bud27∆). As the prefoldin-like Bud27 protein
participates in ribosome biogenesis and translation, we hypothesized that Npa3
may also regulate these biological processes. We investigated this proposal by
using Saccharomyces cerevisiae strains episomally expressing either wild-type
Npa3 or hypomorphic mutants (Npa3C, Npa3K16R, and Npa3G70A). The
Npa3C mutant fully supports RNAPII nuclear localization and activity. However,
the Npa3K16R and Npa3G70A mutants only partially support RNAPII nuclear
targeting and exhibit a slower growth rate due to a higher reduction in Npa3
function. Cell proliferation in these strains displayed an increased sensitivity to
protein synthesis inhibitors hygromycin B and geneticin/G418
(npa3G70A>npa3K16R>npa3∆C>NPA3 cells) but not to transcriptional
elongation inhibitors 6-azauracil, mycophenolic acid or 1,10-phenanthroline. In all
three mutant strains the increase in sensitivity to both aminoglycoside antibiotics
was totally rescued by expressing NPA3. Protein synthesis, visualized by
quantifying puromycin incorporation into nascent polypeptide chains, was
markedly more sensitive to hygromycin B inhibition in npa3∆C, npa3K16R, and
npa3G70A than NPA3 cells. Notably, high-copy expression of the TIF11 gene,
that encodes the eukaryotic translation initiation factor 1A (eIF1A) protein,
completely suppressed both phenotypes (of reduced basal cell growth and
increased sensitivity to hygromycin B) in npa3∆C cells but not npa3K16R or
npa3G70A cells. We conclude that Npa3 plays a critical RNAPII-independent and8
previously unrecognized role in translation initiation. This finding provides a
rationale for the transcriptional co-regulation of NPA3 and genes involved directly
in translation or in ribosome biogenesis